Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
CBG69272.1Putative transporter; Cluster 0494 with SCAB48001. (510 aa)    
Predicted Functional Partners:
CBG69273.1
Putative glutamine synthetase; Cluster 0495 with SCAB73851; Belongs to the glutamine synthetase family.
 
   
 0.830
CBG69271.1
Conserved hypothetical protein.
       0.638
CBG71558.1
Putative extracellular protein.
  
     0.480
CBG73912.1
Putative nucleobase cation symporter; PMID:11344136.
  
 
   0.433
CBG74968.1
Putative secreted protein.
  
     0.432
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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