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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69284.1Putative integral membrane protein; PMID:16506694; PMID:15827636; PMID:14679241. (402 aa)    
Predicted Functional Partners:
CBG69285.1
Putative secondary metabolite protein; PMID: 15303497.
 
     0.942
CBG69286.1
Putative secondary metabolite protein; PMID: 12642677; PMID: 16506694; PMID: 15827636.
 
     0.888
CBG69283.1
Putative amidase (aminohydrolase); PMID: 10931852.
       0.869
CBG68683.1
Conserved hypothetical protein; TTA-Leu codon(s) 110 may indicate regulation by BldA.
 
     0.803
CBG70323.1
Conserved secondary metabolite protein; PMID: 12642677; PMID: 16506694; PMID: 15303497.
 
     0.761
CBG70322.1
Putative membrane protein; PMID:15313224; PMID:15303497; PMID: 16506694; PMID:16305230.
  
     0.748
CBG70324.1
Conserved secondary metabolite protein; PMID: 16506694; PMID: 12642677.
 
     0.637
CBG74530.1
Putative integral membrane protein; No significant db matches.
  
     0.547
CBG75335.1
Putative regulator; PMID:15328113; PMID:16085885; PMID:9831532; PMID:16207901; PMID:12940979; Similar putative regulators found in many antibiotic production clusters. Several subthreshold TPR hits; TTA-Leu codon(s) 13, 286, 353, 789 may indicate regulation by BldA.
  
     0.539
CBG75394.1
Conserved hypothetical protein.
  
     0.526
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.