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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69316.1Conserved hypothetical protein; Cluster 0508 with SCAB32591; contains a pair of PF03771 (DUF) see also SCAB21831, SCAB21991, SCAB22431, SCAB22451, SCAB22471. (286 aa)    
Predicted Functional Partners:
CBG69315.1
Conserved hypothetical protein; Cluster 0507 with SCAB32581.
       0.701
CBG69317.1
Putative hydrolase; Cluster 0509 with SCAB32601.
       0.666
CBG69318.1
Putative major facilitator transporter; Cluster 0510 with SCAB32611.
       0.666
CBG69319.1
Putative ATP-binding biosynthetic enzyme; PMID: 14693539; PMID:11214968; PMID:9163424; cluster 0116 with SCAB32621 and SCAB11921.
       0.666
CBG69314.1
Conserved hypothetical protein; Cluster 0506 with SCAB32571 which might be frameshifted fragment diverged from SCAB21991; contains a pair of PF03771 (DUF) see also SCAB21831, SCAB22011, SCAB22431, SCAB22451, SCAB22471.
      
0.580
CBG69320.1
Conserved hypothetical protein; Cluster 0511 with SCAB32631.
       0.522
CBG69313.1
Putative ligand-binding membrane protein; Cluster 0505 with SCAB32561.
       0.506
CBG69321.1
Putative major facilitator transporter; PMID: 12446651; cluster 0512 with SCAB32641.
       0.487
CBG69322.1
Conserved hypothetical protein; Cluster 0513 with SCAB32651.
       0.487
CBG69323.1
Putative MarR family transcriptional regulator; Cluster 0514 with SCAB32661.
       0.487
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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