Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBG69325.1Conserved hypothetical protein; Cluster 0516 with SCAB32681. (153 aa)    
Predicted Functional Partners:
CBG69326.1
Conserved hypothetical protein; Cluster 0517 with SCAB32691.
       0.792
CBG69324.1
Conserved hypothetical protein; Cluster 0515 with SCAB32671.
       0.760
CBG69321.1
Putative major facilitator transporter; PMID: 12446651; cluster 0512 with SCAB32641.
       0.649
CBG69322.1
Conserved hypothetical protein; Cluster 0513 with SCAB32651.
       0.649
CBG69323.1
Putative MarR family transcriptional regulator; Cluster 0514 with SCAB32661.
       0.649
CBG69320.1
Conserved hypothetical protein; Cluster 0511 with SCAB32631.
       0.600
CBG69327.1
Putative secreted protein.
       0.568
CBG69317.1
Putative hydrolase; Cluster 0509 with SCAB32601.
       0.477
CBG69318.1
Putative major facilitator transporter; Cluster 0510 with SCAB32611.
       0.476
CBG69319.1
Putative ATP-binding biosynthetic enzyme; PMID: 14693539; PMID:11214968; PMID:9163424; cluster 0116 with SCAB32621 and SCAB11921.
       0.474
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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