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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69379.1Conserved hypothetical protein; Cluster 0547 with SCAB33431. (296 aa)    
Predicted Functional Partners:
CBG70364.1
Putative MFS transporter; PMID: 12936980; cluster 0512 with SCAB22061.
  
     0.638
CBG69321.1
Putative major facilitator transporter; PMID: 12446651; cluster 0512 with SCAB32641.
  
     0.637
CBG69959.1
Conserved hypothetical protein.
  
     0.516
CBG71578.1
Conserved hypothetical protein.
 
     0.506
CBG72305.1
Putative membrane protein.
  
     0.505
CBG69381.1
Hypothetical protein.
  
     0.503
CBG70356.1
Putative ligand-binding membrane protein; Cluster 0505 with SCAB21981.
  
     0.482
CBG69290.1
Putative membrane protein; Cluster 0500 with SCAB32271.
  
     0.472
CBG70419.1
Conserved hypothetical protein; Cluster 0545 with SCAB22561.
  
     0.449
CBG71478.1
Conserved hypothetical protein.
  
     0.449
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.