STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69389.1Putative carboxylesterase; Belongs to the type-B carboxylesterase/lipase family. (451 aa)    
Predicted Functional Partners:
CBG69386.1
Putative family 2 glycosyl hydrolase; Belongs to the glycosyl hydrolase 2 family.
 
 
   0.784
CBG69388.1
Hypothetical protein.
     
 0.774
CBG69387.1
Putative family 3 glycosyl hydrolase.
       0.718
CBG69385.1
Hypothetical protein.
      
0.668
gmk
Putative guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
  0.636
CBG69390.1
Putative hydrolase.
 
   
 0.525
CBG69384.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.496
CBG69391.1
Putative rhamnosidase.
 
 
   0.459
CBG75427.1
Putative secreted arabinase; Belongs to the glycosyl hydrolase 43 family.
 
     0.455
CBG69383.1
Hypothetical protein.
       0.434
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.