Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
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Co-expression
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[Homology]
Score
CBG69569.1Putative hydrolase. (300 aa)    
Predicted Functional Partners:
CBG69570.1
Putative phosphotransferase.
       0.866
CBG69571.1
Conserved hypothetical protein.
       0.719
CBG68288.1
Conserved hypothetical protein.
 
   
 0.674
CBG69572.1
Conserved hypothetical protein.
       0.636
CBG74181.1
Putative nucleotide-sugar hydrolase; PMID:2506427.
  
   
 0.599
CBG74264.1
Conserved hypothetical protein.
  
     0.565
kptA
Putative phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
   
 0.546
CBG69564.1
Conserved hypothetical protein.
       0.526
rnhB
Putative ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.526
CBG69568.1
Conserved hypothetical protein.
       0.526
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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