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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69570.1Putative phosphotransferase. (197 aa)    
Predicted Functional Partners:
CBG69569.1
Putative hydrolase.
       0.862
CBG69571.1
Conserved hypothetical protein.
       0.733
CBG69572.1
Conserved hypothetical protein.
       0.651
CBG68648.1
Putative dioxygenase; PMID:8534977.
  
     0.586
rnhB
Putative ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
     
 0.570
CBG68620.1
Putative POSSIBLE DIOXYGENASE.
  
     0.565
CBG69405.1
Putative secreted protein.
  
 
  0.565
CBG69568.1
Conserved hypothetical protein.
    
  0.559
cobI
Precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase; Probable bifunctional protein, CobI-CobJ fusion protein: S-adenosyl-L-methionine-precorrin-2 methyl transferase + precorrin-3 methylase.
  
  
 0.545
CBG75967.1
Putative dioxygenase.
  
     0.540
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.