Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG69665.1Putative secreted cellulase. (740 aa)    
Predicted Functional Partners:
CBG70726.1
Putative xylanase/cellulase; PMID: 12876348; PMID: 9251186.
 
 
 0.862
CBG69663.1
Putative secreted sugar hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
   0.839
CBG69664.1
Putative beta-galactosidase.
  
    0.790
SCAB_6021
Putative glycosyl hydrolase.
  
 
   0.777
CBG70792.1
Putative secreted cellulase/xylanase.
  
 
   0.776
xlnA
Xylanase A.
  
 
   0.766
tomA
Putative tomatinase; PMID: 15686551; PMID:16255248; PMID:9251186; pathogenicity.
  
 
   0.746
CBG75198.1
Putative poly(3-hydroxyalkanoate) depolymerase C precursor.
 
 
 0.728
CBG72151.1
Putative secreted cellulase; PMID: 8718854; TTA-Leu codon(s) 5 may indicate regulation by BldA.
 
 
 0.662
xlnB
Putative secreted endo-1,4-beta-xylanase B (xylanase B); PMID:7533741; PMID:1743521; PMID:15650852; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
   
 0.661
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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