CBG69744.1 protein (Streptomyces scabiei) - STRING interaction network

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Score

CBG69744.1

Conserved hypothetical protein. (228 aa)

Predicted Functional Partners:

rpmB

0.937

rpsC

0.910

rnc

0.896

rpmF

0.886

rplU

0.850

rplJ

0.831

rpsP

0.828

rspT

0.828

rpsF

0.825

rpsB

0.821

Your Current Organism:

Streptomyces scabiei

NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG69744.1	rnc	SCAB_26401	SCAB_26391	Conserved hypothetical protein.	Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.896
CBG69744.1	rplJ	SCAB_26401	SCAB_37211	Conserved hypothetical protein.	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.831
CBG69744.1	rplU	SCAB_26401	SCAB_60151	Conserved hypothetical protein.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.850
CBG69744.1	rpmB	SCAB_26401	SCAB_26481	Conserved hypothetical protein.	Putative 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.937
CBG69744.1	rpmF	SCAB_26401	SCAB_41531	Conserved hypothetical protein.	Putative 50S ribosomal protein; Belongs to the bacterial ribosomal protein bL32 family.	0.886
CBG69744.1	rpsB	SCAB_26401	SCAB_26021	Conserved hypothetical protein.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.821
CBG69744.1	rpsC	SCAB_26401	SCAB_36881	Conserved hypothetical protein.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.910
CBG69744.1	rpsF	SCAB_26401	SCAB_46101	Conserved hypothetical protein.	Putative 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.825
CBG69744.1	rpsP	SCAB_26401	SCAB_26191	Conserved hypothetical protein.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.828
CBG69744.1	rspT	SCAB_26401	SCAB_61451	Conserved hypothetical protein.	30s ribosomal protein S20.	0.828
rnc	CBG69744.1	SCAB_26391	SCAB_26401	Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Conserved hypothetical protein.	0.896
rnc	rplJ	SCAB_26391	SCAB_37211	Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.444
rnc	rplU	SCAB_26391	SCAB_60151	Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.794
rnc	rpmB	SCAB_26391	SCAB_26481	Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Putative 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.869
rnc	rpmF	SCAB_26391	SCAB_41531	Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Putative 50S ribosomal protein; Belongs to the bacterial ribosomal protein bL32 family.	0.898
rnc	rpsB	SCAB_26391	SCAB_26021	Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.897
rnc	rpsC	SCAB_26391	SCAB_36881	Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.825
rnc	rpsF	SCAB_26391	SCAB_46101	Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	Putative 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.866
rnc	rpsP	SCAB_26391	SCAB_26191	Putative ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.878
rplJ	CBG69744.1	SCAB_37211	SCAB_26401	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Conserved hypothetical protein.	0.831