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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69755.1Putative transcriptional regulator. (77 aa)    
Predicted Functional Partners:
CBG69756.1
Putative lipoprotein.
       0.843
thiL
Putative thiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
 
     0.777
CBG69753.1
Phosphomethylpyrimidine kinase.
       0.748
CBG71210.1
Putative anion-transporting ATPase.
  
     0.563
CBG72039.1
Conserved hypothetical protein.
  
     0.551
CBG73751.1
Conserved hypothetical protein.
  
     0.542
CBG71211.1
Putative anion-transporting ATPase.
  
     0.516
CBG73784.1
Putative SAM-dependent methyltransferase.
  
     0.488
CBG73255.1
Putative regulator; PMID:9141673.
  
     0.462
CBG71687.1
Putative SsgA-like sporulation/cell division regulator; PMID: 9141673; PMID:12562798.
  
     0.413
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.