Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cabBPutative calcium-binding protein; PMID: 15766784. (70 aa)    
Predicted Functional Partners:
CBG70998.1
Putative acetoin utilization protein.
    
 0.847
gmk
Putative guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 0.832
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
 
 0.775
fkbB
Putative peptidyl-prolyl cis-trans isomerase subunit; PMID:8062824.
   
 0.766
fkbP
Peptidyl-prolyl cis-trans isomerase subunit; PMID:1381710.
   
 0.766
CBG73414.1
Putative secreted protein; TTA-Leu codon(s) 4 may indicate regulation by BldA.
    
 
 0.758
CBG68670.1
Putative dioxygenanse; PMID:1937018; nearest matches eukaryotic proteins.
    
 
 0.752
CBG69877.1
Putative membrane protein.
       0.742
CBG69875.1
Conserved hypothetical protein.
     
 0.735
CBG71626.1
Putative peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.713
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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