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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_2801Putative two-component system response regulator. (219 aa)    
Predicted Functional Partners:
SCAB_2791
Putative two-component system sensor kinase.
 
 
 0.933
CBG69622.1
Putative sensory histidine kinase.
  
 
 0.791
SCAB_9991
Putative two-component system sensor kinase.
  
   0.767
CBG75792.1
Putative two component sensor kinase.
 
 0.766
SCAB_1071
Putative two component system sensor kinase.
 
 
 0.763
CBG73605.1
Putative two-component sensor kinase.
 
 
 0.755
CBG71434.1
Putative two component sensor kinase; TTA-Leu codon(s) 4 may indicate regulation by BldA.
 
 0.753
CBG74712.1
Putative two component sensor kinase; PMID:16723579.
 
 
 0.752
CBG70474.1
Putative two component system histidine kinase.
 
 
 0.750
CBG71043.1
Putative two component sensor kinase.
 
 0.743
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.