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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69914.1Putative binding-protein dependent transporter. (274 aa)    
Predicted Functional Partners:
CBG69913.1
Putative binding-protein dependent transporter.
   0.977
msiK
Putative maltose/cellubiose ABC transporter ATP-binding subunit; PMID: 9068663; PMID: 7494485; Belongs to the ABC transporter superfamily.
 
 
 0.976
CBG69912.1
Putative extracellular solute-binding lipoprotein.
 
 
 0.975
SCAB_0561
Putative binding protein dependent transport protein.
 
 0.884
CBG69220.1
Probable transmembrane transport protein.
 
 
 0.880
CBG75608.1
Putative sugar-transporter integral membrane protein.
 
 0.857
SCAB_8181
Putative integral membrane binding-protein-dependent transport protein.
 
 
 0.812
CBG70102.1
Putative binding-protein dependent transport protein.
   0.810
CBG70123.1
Putative sugar binding-protein-dependent transporter; PMID: 11741848.
 
 0.806
CBG75176.1
Putative integral membrane transport protein.
 
 
 0.804
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.