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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG69932.1Putative MarR family transcriptional regulator. (169 aa)    
Predicted Functional Partners:
CBG69941.1
Putative transcriptional regulator; PMID: 10099135.
 
   
 0.753
CBG72525.1
Putative membrane protein; PMID:8181754.
   
    0.747
CBG73995.1
Putative ArsR-family regulator.
   
    0.722
CBG68904.1
Putative SIR2 family transcriptional regulator.
   
    0.714
SCAB_4811
Conserved hypothetical protein.
   
    0.714
CBG68473.1
Putative transcriptional regulator.
   
    0.693
CBG75891.1
Putative AraC-family regulatory protein.
   
    0.693
CBG69933.1
Putative TetR-family regulator.
       0.691
CBG69935.1
Conserved hypothetical protein; PMID: 14762003.
       0.688
CBG69936.1
Conserved hypothetical protein.
       0.675
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.