Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBG69954.1Putative ABC transporter integral membrane subunit. (288 aa)    
Predicted Functional Partners:
CBG69953.1
Putative ABC transporter ATP-binding subunit.
 
     0.943
CBG69951.1
Putative ABC transporter ATP-binding subunit.
 
     0.859
CBG69952.1
Putative ABC transporter integral membrane subunit.
 
    
0.798
CBG75558.1
ABC transporter ATP-binding protein.
 
     0.747
abpS
Putative cellulose-binding protein.
 
   0.722
CBG69949.1
Putative large Ala/Glu-rich protein.
 
   0.696
CBG69948.1
Conserved hypothetical protein.
       0.585
fadA
Putative acetyl-coA C-acetyltransferase FadA; PMID:11518326; Belongs to the thiolase-like superfamily. Thiolase family.
       0.580
CBG69946.1
Putative ArgK-like transport regulator kinase; Cluster 0552 with SCAB23051.
       0.526
CBG75225.1
Hypothetical protein.
       0.525
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.