Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG70022.1Putative type I restriction enzyme fragment. (220 aa)    
Predicted Functional Partners:
CBG70023.1
Putative type I restriction enzyme; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.992
CBG70021.1
Putative type I restriction modification system protein.
 
 
 0.989
CBG72468.1
Putative N-methyltransferase; Maybe part of R-M system; cluster 0425 with SCAB16401.
 
 
 0.971
CBG68775.1
Putative N-methyltransferase; Maybe part of R-M system; cluster 0425 with SCAB54351.
 
 
 0.970
CBG70024.1
Conserved hypothetical protein.
 
    0.957
CBG68750.1
Conserved hypothetical protein.
  
 
 0.909
CBG69238.1
Hypothetical protein; Cluster 0488 with SCAB65911.
  
 
 0.909
CBG72208.1
Conserved hypothetical protein.
  
 
 0.909
CBG73591.1
Conserved hypothetical protein; Cluster 0488 with SCAB21241.
  
 
 0.909
CBG70025.1
Putative helicase.
       0.797
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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