STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG70083.1Putative 2-oxoglutarate dehydrogenase. (1253 aa)    
Predicted Functional Partners:
CBG73705.1
Putative dihydrolipoamide dehydrogenase; PMID:9858775.
 
 0.999
CBG70560.1
Putative oxidoreductase.
 
 0.998
CBG73704.1
Putative dihydrolipoyllysine-residue succinyltransferase; PMID:8504804; pair of direct repeats and Pro/Ala tract (entirely G/C).
 
0.998
CBG68278.1
Probable oxidoreductase.
  
 0.997
CBG68419.1
Putative secreted oxidase.
  
 0.997
CBG69198.1
Putative flavoprotein oxidoreductase.
  
 0.997
bkdG
E1-beta branched-chain alpha-keto-acid dehydrogenase system; PMID: 7768860; PMID:15328113.
  
 0.996
bkdB
E1-beta branched-chain alpha keto acid dehydrogenase; PMID: 8002616.
 
 0.996
pdhB
PROBABLE PYRUVATE DEHYDROGENASE E1 COMPONENT (BETA SUBUNIT) PDHB (PYRUVATE DECARBOXYLASE) (PYRUVATE DEHYDROGENASE) (PYRUVIC DEHYDROGENASE).
 
 0.996
CBG74602.1
Conserved hypothetical protein.
    
 
 0.991
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.