Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
catRHydrogen peroxide sensitive repressor; Belongs to the Fur family. (139 aa)    
Predicted Functional Partners:
CBG70152.1
Conserved hypothetical protein.
       0.802
cpeB
Catalase/peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
     
 0.707
rpoA
DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.661
CBG72017.1
Putative metal-ion-uptake regulator; Belongs to the Fur family.
  
   
 0.643
CBG73216.1
Putative metal uptake regulator; PMID:2993806; Belongs to the Fur family.
  
   
 0.610
CBG73995.1
Putative ArsR-family regulator.
  
    0.540
CBG70151.1
Putative inositol monophosphatase.
  
    0.532
CBG74748.1
Conserved hypothetical protein.
  
    0.525
rpoB
DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.506
CBG69622.1
Putative sensory histidine kinase.
   
 
 0.500
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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