Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_3181Putative membrane protein. (366 aa)    
Predicted Functional Partners:
CBG69959.1
Conserved hypothetical protein.
  
     0.758
CBG70364.1
Putative MFS transporter; PMID: 12936980; cluster 0512 with SCAB22061.
  
     0.752
CBG72303.1
Putative mobilisation relaxase component; PMID: 12584005; cluster 0122: SCAB21791, SCAB32311, SCAB48651, SCAB52671.
  
     0.750
CBG69294.1
Putative mobilisation relaxase component; PMID: 12584005; cluster 0122: SCAB21791, SCAB32311, SCAB48651, SCAB52671.
  
     0.746
CBG70332.1
Putative mobilisation relaxase component; PMID: 12584005; cluster 0122: SCAB21791, SCAB32311, SCAB48651, SCAB52671.
  
     0.740
CBG74087.1
Conserved hypothetical protein.
  
     0.735
CBG69321.1
Putative major facilitator transporter; PMID: 12446651; cluster 0512 with SCAB32641.
  
     0.734
CBG71578.1
Conserved hypothetical protein.
  
     0.734
CBG74019.1
Conserved hypothetical protein.
  
     0.733
CBG73551.1
Putative integral membrane protein.
  
     0.724
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.