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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG70321.1Putative membrane protein; PMID: 16305230. (193 aa)    
Predicted Functional Partners:
CBG70322.1
Putative membrane protein; PMID:15313224; PMID:15303497; PMID: 16506694; PMID:16305230.
 
     0.932
CBG70323.1
Conserved secondary metabolite protein; PMID: 12642677; PMID: 16506694; PMID: 15303497.
 
     0.838
CBG69873.1
Conserved hypothetical protein.
  
    0.602
CBG70324.1
Conserved secondary metabolite protein; PMID: 16506694; PMID: 12642677.
 
     0.595
SCAB_7471
Conserved hypothetical protein.
  
     0.571
CBG69861.1
Putative hydrolase.
  
     0.560
CBG74530.1
Putative integral membrane protein; No significant db matches.
  
   0.556
CBG69872.1
Conserved hypothetical protein.
  
     0.551
CBG69871.1
Conserved hypothetical protein; PMID: 15828858.
  
     0.519
CBG71129.1
Conserved hypothetical protein.
  
    0.497
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.