Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG70360.1Putative hydrolase; Cluster 0509 with SCAB22021. (217 aa)    
Predicted Functional Partners:
CBG70361.1
Putative MFS transporter; Cluster 0510 with SCAB22031.
       0.792
CBG70362.1
Putative ATP-binding biosynthetic enzyme; PMID: 14693539; cluster 0166 with SCAB22041 and SCAB11921.
       0.791
CBG70359.1
Conserved hypothetical protein; Cluster 0508 with SCAB22011.
       0.655
SCAB_32581
Conserved hypothetical protein (fragment); HMMPfam hit to PF03771, Domain of unknown function (DUF317), score 1.7e-15.
       0.594
CBG70363.1
Conserved hypothetical protein; Cluster 0511 with SCAB22051.
       0.541
CBG70364.1
Putative MFS transporter; PMID: 12936980; cluster 0512 with SCAB22061.
       0.506
CBG70365.1
Conserved hypothetical protein; Cluster 0513 with SCAB22071.
       0.506
CBG70366.1
Putative MarR family transcriptional regulator; Cluster 0514 with SCAB22081.
       0.506
CBG70367.1
Conserved hypothetical protein; Cluster 0515 with SCAB22091.
       0.446
CBG70368.1
Conserved hypothetical protein; Cluster 0516 with SCAB22101.
       0.443
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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