Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_3261Putative integral membrane transport protein. (300 aa)    
Predicted Functional Partners:
SCAB_3271
Putative ABC transporter ATP-binding protein.
 
  
 0.961
CBG71069.1
Putative ABC transporter ATP-binding subunit.
 
  
 0.835
CBG73637.1
Probable ABC transporter ATP-binding subunit; PMID:8326867; PMID:15837373.
 
  
 0.835
CBG74240.1
Putative ABC-transporter ATP-binding subunit.
 
  
 0.835
CBG71587.1
Putative ABC-transporter ATP-binding subunit.
 
  
 0.834
CBG75621.1
Putative ABC transport system ATP-binding protein.
 
  
 0.822
CBG75620.1
Putative ABC transport system integral membrane protein.
 
 
0.799
CBG69965.1
Putative ABC transporter, ATP-binding subunit.
 
  
 0.747
CBG73824.1
Putative ABC transporter ATP-binding subunit.
 
  
 0.681
CBG69966.1
Putative ABC transporter, integral membrane subunit; PMID: 8757400.
  
  
 
0.530
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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