Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_3311Putative carrier protein for NRPS multienzyme. (93 aa)    
Predicted Functional Partners:
CBG68821.1
Putative respiratory chain oxidoreductase; TTA-Leu codon(s) 59 may indicate regulation by BldA.
  
 0.931
SCAB_3321
Putative non-ribosomal peptide synthetase; PMID:10801488; PMID:9006024; PMID:16647040; PMID:9427658.
 
 
 0.919
SCAB_3281
Putative NRPS-associated AMP-binding protein; PMID:15870461; PMID:16208464; PMID:15113000.
 
   0.792
CBG68557.1
Putative PROBABLE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.780
CBG73306.1
Putative type I polyketide synthase component; PMID:16208464; PMID:15870461.
 
 
 0.742
SCAB_3291
Putative oxidoreductase; Cluster 0135 collects two pairs: SCAB3291 and SCAB3301, SCAB62911 and SCAB62921.
 
  
  0.688
SCAB_3301
Putative oxidoreductase; Cluster 0135 collects two pairs: SCAB3291 and SCAB3301, SCAB62911 and SCAB62921.
 
  
  0.675
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
 0.660
SCAB_1471
Putative non-ribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.655
SCAB_1481
Putative non-ribosomal peptide synthase component.
 
  
 0.639
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.