Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG70414.1Putative membrane protein; Cluster 0541 with SCAB22481; TTA-Leu codon(s) 589 may indicate regulation by BldA. (598 aa)    
Predicted Functional Partners:
CBG70859.1
Putative ATP/GTP-binding protein.
 
  
 0.804
CBG69340.1
Putative ATP/GTP-binding protein; Cluster 0209 with SCAB32831 and SCAB49211.
 
  
 0.798
CBG70383.1
Putative ATP/GTP-binding protein; Cluster 0209 with SCAB22251 and SCAB49211.
 
  
 0.797
CBG69338.1
Putative lipoprotein.
 
   
 0.786
CBG70380.1
Putative membrane protein.
 
   
 0.785
CBG69337.1
Putative ATP-binding integral membrane protein; MID:15828858; PMID:12589432; cluster 0525 with SCAB32791.
 
   
 0.782
CBG70858.1
Putative secreted protein.
 
   
 0.782
CBG70379.1
Putative ATP-binding integral membrane protein; PMID:12589432; cluster 0525 with SCAB22221.
 
   
 0.778
CBG70332.1
Putative mobilisation relaxase component; PMID: 12584005; cluster 0122: SCAB21791, SCAB32311, SCAB48651, SCAB52671.
 
   
 0.766
CBG69294.1
Putative mobilisation relaxase component; PMID: 12584005; cluster 0122: SCAB21791, SCAB32311, SCAB48651, SCAB52671.
 
   
 0.765
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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