Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
CBG70491.1Putative IclR-family transcriptional regulatory protein. (253 aa)    
Predicted Functional Partners:
CBG70490.1
Conserved hypothetical protein.
       0.857
CBG70492.1
Putative carbohydrate kinase.
 
     0.846
CBG74349.1
Urea carboxylase.
  
    0.795
CBG74573.1
Conserved hypothetical protein.
  
    0.788
CBG75735.1
Putative transcriptional regulator.
  
     0.774
CBG75026.1
Putative transcriptional regulator.
  
     0.771
CBG70493.1
Conserved hypothetical protein.
  
    0.765
CBG70494.1
Putative D-aminoacylase; PMID: 16208464.
       0.726
CBG70489.1
Conserved hypothetical protein.
       0.624
CBG74283.1
Putative gluconate transporter.
       0.526
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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