STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG70617.1Putative secreted protein. (218 aa)    
Predicted Functional Partners:
CBG68980.1
Conserved hypothetical protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
 0.982
CBG68959.1
Putative allantoinase.
 
  
 0.974
CBG73913.1
Putative racemase/epimerase.
 
  
  0.933
CBG68981.1
Conserved hypothetical protein.
  
  
 
0.925
CBG68979.1
Putative uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
   
 0.793
CBG75223.1
Hypothetical protein; Belongs to the HpcH/HpaI aldolase family.
 
     0.775
alc
Putative allantoicase; Belongs to the allantoicase family.
 
  
 0.763
CBG70616.1
Putative secreted glycosylhydrolase.
       0.710
CBG70618.1
Putative succinate dehydrogenase membrane subunit.
       0.701
CBG70619.1
Putative succinate dehydrogenase membrane subunit.
       0.701
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.