Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG70637.1Putative integral membrane protein. (135 aa)    
Predicted Functional Partners:
CBG70639.1
Putative tetR-family transcriptional regulator.
 
     0.937
CBG70638.1
Conserved hypothetical protein.
       0.874
CBG70636.1
Conserved hypothetical protein.
       0.637
CBG75746.1
Putative leucine-rich repeat protein.
  
     0.529
CBG70618.1
Putative succinate dehydrogenase membrane subunit.
       0.526
CBG70619.1
Putative succinate dehydrogenase membrane subunit.
       0.526
dhsB
Putative succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
       0.526
CBG69638.1
Putative large Pro/Ala/Gly-rich protein.
  
     0.498
CBG70862.1
Conserved hypothetical protein.
  
     0.431
CBG70394.1
Putative lambdoid prophage protein; PMID: 6221115.
  
     0.430
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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