Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG70639.1Putative tetR-family transcriptional regulator. (268 aa)    
Predicted Functional Partners:
CBG70637.1
Putative integral membrane protein.
 
     0.937
CBG70638.1
Conserved hypothetical protein.
       0.868
CBG70636.1
Conserved hypothetical protein.
       0.703
CBG70617.1
Putative secreted protein.
       0.526
CBG70618.1
Putative succinate dehydrogenase membrane subunit.
       0.526
CBG70619.1
Putative succinate dehydrogenase membrane subunit.
       0.526
dhsB
Putative succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
       0.526
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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