Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG70648.1Putative oxidoreductase. (495 aa)    
Predicted Functional Partners:
CBG70646.1
Putative prenyltransferase; Belongs to the UbiA prenyltransferase family.
 
  
 0.954
CBG70649.1
Putative short-chain dehydrogenase.
 
  
 0.954
CBG70647.1
Putative integral membrane protein.
     
 0.776
CBG70645.1
Putative integral membrane protein.
       0.682
CBG68821.1
Putative respiratory chain oxidoreductase; TTA-Leu codon(s) 59 may indicate regulation by BldA.
   
 0.547
CBG75221.1
Putative electron transfer flavoprotein, alpha subunit.
  
 
 0.472
CBG75220.1
Putative electron transfer flavoprotein, beta subunit.
  
 
 0.416
CBG73371.1
Conserved hypothetical protein.
 
     0.414
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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