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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG70661.1Putative integral membrane protein. (278 aa)    
Predicted Functional Partners:
folD
Methylenetetrahydrofolatedehydrogenase/cyclohyd ro lase); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.814
CBG70663.1
Putative integral membrane protein.
       0.734
CBG72457.1
Conserved hypothetical protein.
  
     0.719
CBG72948.1
Putative sortase-sorted protein; Possible sortase signal LAETG.
  
     0.715
CBG74493.1
Conserved hypothetical protein.
  
     0.712
CBG69949.1
Putative large Ala/Glu-rich protein.
  
     0.701
CBG69561.1
Conserved hypothetical protein.
  
     0.698
CBG71014.1
Alanine-rich hypothetical protein.
  
     0.698
CBG71262.1
Conserved hypothetical protein.
  
     0.694
CBG71657.1
Putative membrane protein.
  
     0.693
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.