Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_3571GntR-family transcriptional regulator. (231 aa)    
Predicted Functional Partners:
CBG69051.1
Putative GntR family transcriptional regulator.
  
     0.772
CBG75374.1
Putative GntR-famly transcriptional regulator.
  
  
 0.762
SCAB_6591
GntR-family transcriptional regulator.
  
  
 0.757
CBG69557.1
Sporulation transcription factor, WhiH.
  
  
 0.752
pdhR
Pyruvate dehydrogenase complex repressor.
  
  
 0.742
CBG74577.1
Putative GntR-family transcriptional regulator.
  
     0.713
CBG75854.1
Putative GntR family transcriptional regulator.
  
  
 0.645
CBG74285.1
Putative transcriptional regulator.
  
  
 0.554
soxB
Putative sarcosine oxidase beta subunit.
  
    0.533
soxG
Putative sarcosine oxidase gamma subunit.
       0.526
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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