Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBG70669.1Conserved hypothetical protein. (328 aa)    
Predicted Functional Partners:
CBG70668.1
Putative integral membrane protein.
 
     0.843
CBG72785.1
Conserved hypothetical protein; PMID:PMID:2123814.
  
     0.729
SCAB_8341
Putative secreted protein.
  
     0.720
CBG71234.1
Putative membrane protein.
  
     0.712
CBG70742.1
Putative secreted protein.
  
    0.703
CBG69638.1
Putative large Pro/Ala/Gly-rich protein.
 
     0.654
CBG71664.1
Conserved hypothetical protein.
 
    0.648
CBG72609.1
Putative integral membrane protein.
 
   
 0.630
CBG70993.1
Putative membrane protein.
 
     0.622
CBG72428.1
Putative membrane protein; Possibly subunit of ATP transporter system.
  
   
 0.603
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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