Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG70680.1Putative secreted peptidase. (526 aa)    
Predicted Functional Partners:
CBG71662.1
Putative secreted transglycosylase.
  
   
 0.642
CBG70457.1
Putative penicillin-binding protein.
  
   
 0.632
CBG72706.1
Putative antigen penicillin-binding protein; See low complexity regions.
  
   
 0.622
CBG73448.1
Putative secreted penicillin-binding protein.
  
   
 0.621
CBG71213.1
Putative penicillin-binding transpeptidase/transglycosylase.
  
   
 0.592
icmB
Isobutyryl CoA mutase small subunit; PMID: 10531377.
       0.526
CBG70679.1
Putative secreted lipase.
       0.526
CBG72401.1
Putative penicillin-binding protein; PMID:10681345.
 
   
 0.495
CBG69583.1
Putative guanosine tetraphosphate (ppGpp) metabolism protein; Cluster 0567 with SCAB74961; possible NIS system.
  
     0.439
mltG
Putative integral membrane protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
  
 0.431
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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