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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG70684.1Putative secreted protein. (359 aa)    
Predicted Functional Partners:
ftsE
Cell division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.599
ftsX
Putative cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.568
CBG70683.1
Putative integral membrane protein.
       0.542
CBG71979.1
Putative secreted transglycosylase.
 
  
0.542
CBG70171.1
Conserved hypothetical protein; Doubtful CDS.
  
  
 0.488
CBG71546.1
Conserved hypothetical protein.
  
  
 0.488
CBG74451.1
Putative integral membrane protein; PMID:12608576.
  
  
 0.488
CBG73743.1
Putative secreted protein; Contains possible coiled coil regions.
 
  
0.441
CBG70851.1
Putative secreted protein.
 
  
 0.437
CBG72422.1
Conserved hypothetical protein.
  
  
 0.432
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.