Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG70686.1Putative two-component system sensor kinase. (441 aa)    
Predicted Functional Partners:
CBG70685.1
Putative two-component system response regulator.
 
 
 0.960
CBG73717.1
Conserved hypothetical protein; PF04012 may indicate sigma-54-regulator function.
 
 
 0.912
SCAB_0821
Conserved hypothetical protein; PAS domain may indicate role in signal detection.
  
 
 0.907
CBG69622.1
Putative sensory histidine kinase.
  
 
 0.903
CBG75927.1
Putative two-component sensor kinase.
  
 
 0.883
CBG70687.1
Putative integral membrane protein.
 
  
 0.758
CBG74876.1
Conserved hypothetical protein; PAS domain may indicate role in signal detection.
  
 
 0.744
CBG73171.1
Putative sensor kinase.
  
 
 0.693
CBG71683.1
Putative membrane protein.
  
  
 0.658
CBG71764.1
Putative bifunctional sensor kinase/response regulator.
   
 
 0.586
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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