Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG70843.1Putative oxidoreductase; PMID: 15328113. (353 aa)    
Predicted Functional Partners:
CBG70842.1
Putative oxidoreductase; PMID: 15328113.
 
 0.999
CBG73321.1
Putative thiamine-pyrophosphate-binding oxidoreductase alpha subunit; PMID:15328113.
 
 0.999
pta
Putative phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 0.954
idh
NADP(+)-dependent isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
  
 
 0.938
CBG70083.1
Putative 2-oxoglutarate dehydrogenase.
  
 
 0.923
plfB
Formate acetyltransferase.
    
 0.920
mutA
Putative methylmalonyl-CoA mutase small subunit MutA (MCM); PMID: 8099072.
    
 0.920
mutB
Putative Methylmalonyl-CoA mutase large subunit MutB (MCM); PMID: 8099072.
    
 0.920
pyk2
Putative pyruvate kinase; Cluster 0606 with SCAB68861; Belongs to the pyruvate kinase family.
  
 0.920
pyk1
Putative pyruvate kinase; Cluster 0606 with SCAB28241; Belongs to the pyruvate kinase family.
  
 0.920
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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