Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG70859.1Putative ATP/GTP-binding protein. (492 aa)    
Predicted Functional Partners:
CBG70858.1
Putative secreted protein.
 
   
 0.953
CBG70857.1
Putative integral membrane protein.
 
     0.941
CBG70856.1
Conserved hypothetical protein.
 
     0.935
CBG70852.1
Conserved hypothetical protein.
 
     0.815
CBG70414.1
Putative membrane protein; Cluster 0541 with SCAB22481; TTA-Leu codon(s) 589 may indicate regulation by BldA.
 
  
 0.804
CBG69363.1
Putative membrane protein; Cluster 0541 with SCAB33161.
 
  
 0.803
CBG71971.1
Putative membrane protein.
 
  
 0.735
CBG71137.1
Putative TraG/TraD family protein.
 
  
 0.721
CBG70855.1
Putative membrane protein.
       0.630
CBG72581.1
Conserved hypothetical protein.
  
     0.548
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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