Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG70927.1Putative gas vesicle synthesis protein. (67 aa)    
Predicted Functional Partners:
CBG70932.1
Putative gas vesicle synthesis protein K; PMID: 9573198.
     
 0.801
CBG70930.1
Putative gas vesicle synthesis protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
     
 0.798
CBG70928.1
Conserved hypothetical protein.
       0.795
CBG70931.1
Putative gas vesicle synthesis protein.
     
 0.793
CBG70929.1
Putative cyclase/dehydratase.
       0.791
CBG70933.1
Putative zinc-binding protein.
       0.618
CBG70934.1
Putative iron/ascorbate oxidoreductase family protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
       0.618
CBG70926.1
Putative gas vesicle synthesis protein.
     
 0.589
gvpA-2
Putative gas vesicle synthesis protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
     
 0.582
CBG70924.1
Putative gas vesicle synthesis protein.
     
 0.432
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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