Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
CBG70956.1Putative regulator. (131 aa)    
Predicted Functional Partners:
SCAB_43021
Conserved hypothetical protein (fragment).
 
  
 0.767
CBG69622.1
Putative sensory histidine kinase.
   
 
 0.703
CBG71373.1
Putative ABC transporter transmembrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
   
 0.669
CBG71374.1
Putative ABC transporter ATP-binding subunit; Belongs to the ABC transporter superfamily.
   
   0.548
pheT
Putative phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.540
CBG70182.1
Putative integral membrane protein.
       0.526
SCAB_7231
Putative integral membrane protein.
       0.526
CBG70955.1
Putative pyridoxal-5'-phosphate dependent aminotransferase.
       0.476
moaC
Molybdenum cofactor biosynthesis protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
   
 0.460
SCAB_0821
Conserved hypothetical protein; PAS domain may indicate role in signal detection.
   
 
 0.438
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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