Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CBG71007.1Conserved hypothetical protein. (117 aa)    
Predicted Functional Partners:
CBG71006.1
Putative integral membrane protein.
       0.743
CBG71003.1
Putative ABC transporter subunit.
 
     0.672
CBG71004.1
Putative ABC transporter ATP-binding subunit.
 
     0.652
CBG71005.1
Putative SAM-dependent methyltransferase.
       0.652
CBG71008.1
Putative serine/threonine protein kinase; PMID: 9799102.
  
 
 0.608
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
  
 0.605
CBG68903.1
Putative serine/threonine protein kinase (fragment).
     
 0.467
CBG73171.1
Putative sensor kinase.
  
  
 0.447
CBG69787.1
Putative serine protease; PMID: 1755852; PMID: 15601713; PMID: 7773379.
  
     0.442
CBG69125.1
Putative phosphotransferase.
  
     0.433
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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