STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG71013.1Conserved hypothetical protein. (306 aa)    
Predicted Functional Partners:
CBG71012.1
Putative phosphatase.
       0.778
CBG72039.1
Conserved hypothetical protein.
  
     0.704
CBG71010.1
Putative transcriptional regulator.
       0.675
CBG71011.1
Conserved hypothetical protein.
       0.675
CBG70230.1
Conserved hypothetical protein; PMID: 9748440; PMID: 8458843.
  
     0.646
ilvD
Dihydroxy acid/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
       0.625
CBG71210.1
Putative anion-transporting ATPase.
  
     0.569
CBG71211.1
Putative anion-transporting ATPase.
  
     0.485
CBG72032.1
Putative DNA-binding protein.
  
     0.485
CBG71664.1
Conserved hypothetical protein.
  
     0.465
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.