Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SCAB_3941Putative ArsR-family transcriptional regulator. (208 aa)    
Predicted Functional Partners:
CBG70423.1
Conserved hypothetical protein.
  
     0.712
glyA
Putative serine hydroxymethyltransferase.
 
     0.694
CBG70957.1
Putative phosphotransferase; TTA-Leu codon(s) 68 may indicate regulation by BldA.
  
     0.604
CBG70607.1
Putative peptidoglycan binding protein.
  
     0.585
CBG75894.1
Conserved hypothetical protein; Belongs to the peptidase S51 family.
  
     0.517
CBG69172.1
Conserved hypothetical protein.
  
     0.488
SCAB_8571
Putative tetracycline resistance protein.
  
     0.486
CBG71665.1
Conserved hypothetical protein.
  
     0.481
SCAB_4141
Putative integral membrane protein.
  
     0.473
CBG71664.1
Conserved hypothetical protein.
  
     0.439
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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