Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG71049.1Putative membrane protein. (375 aa)    
Predicted Functional Partners:
CBG71050.1
Putative integral membrane protein.
 
   
 0.925
CBG71048.1
Putative secreted protein.
 
     0.733
CBG71052.1
Conserved hypothetical protein.
       0.669
folB
Putative dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.624
folK
Putative2-amino-4-hydroxy-6-hydroxymethyldihydr op teridinediphosphokinase.
       0.624
CBG71055.1
Putative integral membrane protein.
       0.608
CBG68549.1
Putative oxidoreductase.
  
 
 0.570
CBG68556.1
Putative oxidoreductase.
  
 
 0.570
CBG72202.1
Putative alchohol dehydrogenase.
  
 
 0.570
CBG73561.1
Putative alcohol dehydrogenase (zinc-binding).
  
 
 0.570
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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