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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAB_40211Putative two-component system sensor kinase; 4 probable transmembrane helices predicted for SCAB40201 by TMHMM2.0 at aa 22-41, 48-70, 85-107 and 120-142. (416 aa)    
Predicted Functional Partners:
CBG72591.1
Putative binding-protein-dependent transporter.
 
 0.939
CBG72593.1
Putative extracellular solute-binding protein; TTA-Leu codon(s) 20 may indicate regulation by BldA.
  
  
 
0.928
msiK
Putative maltose/cellubiose ABC transporter ATP-binding subunit; PMID: 9068663; PMID: 7494485; Belongs to the ABC transporter superfamily.
  
 0.910
CBG72592.1
Putative binding-protein-dependent transporter.
 
  0.908
CBG71099.1
4.1.6.
       0.869
CBG71100.1
Conserved hypothetical protein.
       0.830
CBG71102.1
Conserved hypothetical protein; TTA-Leu codon(s) 344 may indicate regulation by BldA.
 
     0.658
SCAB_0551
Putative secreted solute-binding protein (transport system associated).
  
     0.439
CBG72793.1
Putative binding-protein-dependent transport system integral membrane subunit.
 
 
 0.424
CBG74715.1
Putative secreted substrate-binding protein (transport system associated).
  
     0.422
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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