Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG71149.1Putative secreted peptidase. (528 aa)    
Predicted Functional Partners:
CBG73418.1
Conserved hypothetical protein; PMID:7626609.
  
     0.571
holB
Putative DNA polymerase III delta' subunit.
 
    0.569
CBG74925.1
Putative polyketide synthase.
  
 0.558
CBG75341.1
Putative type I polyketide synthase.
  
 0.558
CBG72656.1
Conserved hypothetical protein.
  
     0.463
CBG75786.1
Putative secreted protein.
  
     0.451
CBG69076.1
Putative secreted protein.
  
     0.439
nucS
Conserved hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
     0.433
tmk
Putative thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
   0.430
CBG70950.1
Putative bisphosphoglycerate mutase.
  
 
   0.418
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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