Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
SCAB_4101Conserved hypothetical protein. (260 aa)    
Predicted Functional Partners:
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.524
CBG68406.1
Putative ferritin/DPS-type protein; Cluster 0362 with SCAB25061; Belongs to the Dps family.
  
  
 0.522
CBG69613.1
Putative ferritin/DPS-type protein; Cluster 0362 with SCAB12441; Belongs to the Dps family.
  
  
 0.522
egtD
Hypothetical protein; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
 
     0.518
CBG71634.1
Putative integral membrane protein.
   
    0.481
CBG68342.1
Putative oxidoreductase.
 
    0.443
CBG69868.1
Conserved hypothetical protein.
   
  
 0.411
CBG70867.1
Putative peptidoglycan binding protein.
   
  
 0.411
SCAB_4111
Putative integral membrane protein.
       0.407
CBG73408.1
Putative oxidoreductase.
  
    0.402
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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