Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CBG71249.1Conserved hypothetical protein. (221 aa)    
Predicted Functional Partners:
recR
Putative DNA modification/recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.874
CBG71251.1
Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.757
CBG69535.1
Conserved hypothetical protein.
  
     0.676
CBG73019.1
Putative membrane protein.
  
     0.674
CBG74464.1
Putative secreted protein.
  
     0.660
CBG71252.1
Putative membrane protein.
       0.657
CBG72471.1
Putative lipoprotein.
  
     0.630
CBG70162.1
Putative membrane protein.
  
     0.621
CBG69172.1
Conserved hypothetical protein.
  
     0.611
CBG71706.1
Putative ABC transporter integral membrane subunit.
  
     0.603
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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