Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CBG71359.1Putative transposase; TTA-Leu codon(s) 41 may indicate regulation by BldA. (179 aa)    
Predicted Functional Partners:
CBG71358.1
Conserved hypothetical protein; TTA-Leu codon(s) 107 may indicate regulation by BldA.
     0.957
CBG74989.1
Conserved hypothetical protein; Possibly transposase fragment by similarity (no Pfam); TTA-Leu codon(s) 59 may indicate regulation by BldA.
 
    0.783
CBG71360.1
Putative IS transposase; PMID: 1332944; overlaps SCAB42902 seems to be common pattern see also SCAB0371, SCAB0691, SCAB0991, SCAB23721, SCAB90821.
 
    0.679
CBG70340.1
Conserved hypothetical protein.
 
 
 0.524
CBG69380.1
Conserved hypothetical protein; TTA-Leu codon(s) 92 may indicate regulation by BldA.
  
     0.500
CBG75172.1
Conserved hypothetical protein; Cluster 0734 with SCAB5041.
  
    0.470
SCAB_5041
Conserved hypothetical protein; Cluster 0734 with SCAB82161.
  
    0.467
CBG72852.1
Conserved hypothetical protein.
  
    0.455
CBG73825.1
Putative ABC transporter integral membrane subunit.
  
    0.441
CBG68773.1
Conserved hypothetical protein.
  
     0.435
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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