Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sppFPutative polyketide hydroxylase; PMID:8253693; PMID:8344517; spore pigment. (558 aa)    
Predicted Functional Partners:
CBG75830.1
Putative secreted FAD-binding protein; Cluster 0555 with SCAB23571.
  
     0.558
CBG69470.1
Putative secreted FAD-binding protein; Cluster 0555 with SCAB88941.
  
     0.551
CBG71940.1
Putative monooxygenase.
  
     0.545
SCAB_1021
Putative oxidoreductase.
  
     0.506
CBG69477.1
Putative catechol 1,2-dioxygenase.
 
  
 0.466
catA
Catechol 1,2-dioxygenase.
 
  
 0.460
CBG75811.1
Putative monooxygenase.
  
     0.455
CBG68564.1
Putative catechol 1,2-dioxygenase.
 
  
 0.422
CBG68557.1
Putative PROBABLE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.400
Your Current Organism:
Streptomyces scabiei
NCBI taxonomy Id: 680198
Other names: S. scabiei 87.22, Streptomyces scabiei 87.22, Streptomyces scabiei str. 87.22, Streptomyces scabiei strain 87.22
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